_ec

description

blue light sensor, positive regulation of SigB activity under conditions of blue light

blue light sensor, positive regulation of [[protein|SigB]] activity under conditions of blue light

locus

BSU30340

BSU_30340

geneLength

783

786

function

control of SigB activity

control of [[protein|SigB]] activity

outlinks

bsu

BSU30340

BSU_30340

Gene

Coordinates

3,106,210 → 3,106,995

3,106,210 3,106,995

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|PAS domain]

LOV domain, STAS domain

[SW|PAS domain] (aa 12-87) (according to UniProt)

[SW|PAC domain] (aa 88-138) (according to UniProt)

[SW|STAS domain] (aa 147-258) (according to UniProt)

Biological materials

Mutant

MGNA-A136 (ytvA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/136 NBRP B. subtilis, Japan]

1A965 ( ''ytvA''::''erm''), [Pubmed|11157946], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A965&Search=1A965 BGSC]

MGNA-A136 (ytvA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/136 NBRP B. subtilis, Japan]

1A965 ( ''ytvA''::''erm''), [Pubmed|11157946], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A965&Search=1A965 BGSC]

BKE30340 ([[gene|ytvA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATAAATCCCCCTTAGGC, downstream forward: _UP4_TAAAAAGATCCCGCTCACCC

BKK30340 ([[gene|ytvA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATAAATCCCCCTTAGGC, downstream forward: _UP4_TAAAAAGATCCCGCTCACCC

Biological materials

Expression vector

pGP2685, expression of His-[[protein|YtvA]] in ''E. coli'' (based on [SW|pGP570]), available in [SW|Jörg Stülke]'s lab

Labs working on this gene/protein

[SW|Chet Price], Davis, USA [http://foodscience.ucdavis.edu/price_lab/pricelab.html homepage]

References

Original publications

27203230, 19581299, 16923906, 17575448, 17764689, 17443319, 17200735, 16923909, 16797012, 16022561, 15339223, 11964249, 11157946, 19891470, 20062844, 19783626, 20800068, 22247770, 23047813, 23416074, 23456923, 23817467, 21259411, 21388385, 21410163, 21851109, 22287516, 23861663, 23828427, 23900620, 23940057, 24171435, 24278408, 25211155, 26402155

27203230, 19581299, 16923906, 17575448, 17764689, 17443319, 17200735, 16923909, 16797012, 16022561, 15339223, 11964249, 11157946, 19891470, 20062844, 19783626, 20800068, 22247770, 23047813, 23416074, 23456923, 23817467, 21259411, 21388385, 21410163, 21851109, 22287516, 23861663, 23828427, 23900620, 23940057, 24171435, 24278408, 25211155, 26402155, 31707658, 32579655

Biological materials

Expression vectors

pGP2685, expression of His-[[protein|YtvA]] in ''E. coli'' (based on [SW|pGP570]), available in [SW|Jörg Stülke]'s lab

labs

[SW|Chet Price], Davis, USA [http://foodscience.ucdavis.edu/price_lab/pricelab.html homepage]